STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE22657.1fatty-acyl-CoA synthase. (546 aa)    
Predicted Functional Partners:
SFE85729.1
Epothilone synthetase B.
 
0.987
SFF19374.1
Amino acid adenylation domain-containing protein.
0.982
SFF36086.1
Amino acid adenylation domain-containing protein.
  
0.981
SFF17364.1
Amino acid adenylation domain-containing protein.
  
0.978
SFF19357.1
Amino acid adenylation domain-containing protein.
 
0.978
SFF36120.1
Amino acid adenylation domain-containing protein.
  
0.977
SFF50914.1
Phosphopantetheine attachment site.
 
 0.970
SFF48080.1
Non-ribosomal peptide synthase domain TIGR01720.
 
0.943
SFE86454.1
Amino acid adenylation domain-containing protein.
 
0.910
SFE95292.1
Amino acid adenylation domain-containing protein.
  
0.910
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.