Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD74979.1 | SFD77352.1 | SAMN02745121_01346 | SAMN02745121_01510 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | AMP-binding enzyme C-terminal domain-containing protein. | 0.888 |
SFD74979.1 | SFD94771.1 | SAMN02745121_01346 | SAMN02745121_02377 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | NAD(P)H-flavin reductase. | 0.741 |
SFD74979.1 | SFE22790.1 | SAMN02745121_01346 | SAMN02745121_03528 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | anthraniloyl-CoA monooxygenase. | 0.784 |
SFD74979.1 | SFE86655.1 | SAMN02745121_01346 | SAMN02745121_05864 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Hypothetical protein. | 0.766 |
SFD74979.1 | SFF18093.1 | SAMN02745121_01346 | SAMN02745121_07381 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | benzoate-CoA ligase. | 0.888 |
SFD74979.1 | SFF32608.1 | SAMN02745121_01346 | SAMN02745121_08166 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Enoyl-CoA hydratase/carnithine racemase. | 0.678 |
SFD74979.1 | SFF36086.1 | SAMN02745121_01346 | SAMN02745121_08376 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Amino acid adenylation domain-containing protein. | 0.980 |
SFD74979.1 | SFF36120.1 | SAMN02745121_01346 | SAMN02745121_08379 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Amino acid adenylation domain-containing protein. | 0.979 |
SFD74979.1 | acsA | SAMN02745121_01346 | SAMN02745121_03838 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.888 |
SFD77352.1 | SFD74979.1 | SAMN02745121_01510 | SAMN02745121_01346 | AMP-binding enzyme C-terminal domain-containing protein. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.888 |
SFD77352.1 | SFD94771.1 | SAMN02745121_01510 | SAMN02745121_02377 | AMP-binding enzyme C-terminal domain-containing protein. | NAD(P)H-flavin reductase. | 0.785 |
SFD77352.1 | SFE22790.1 | SAMN02745121_01510 | SAMN02745121_03528 | AMP-binding enzyme C-terminal domain-containing protein. | anthraniloyl-CoA monooxygenase. | 0.938 |
SFD77352.1 | SFE86655.1 | SAMN02745121_01510 | SAMN02745121_05864 | AMP-binding enzyme C-terminal domain-containing protein. | Hypothetical protein. | 0.785 |
SFD77352.1 | SFF32608.1 | SAMN02745121_01510 | SAMN02745121_08166 | AMP-binding enzyme C-terminal domain-containing protein. | Enoyl-CoA hydratase/carnithine racemase. | 0.559 |
SFD77352.1 | SFF32620.1 | SAMN02745121_01510 | SAMN02745121_08167 | AMP-binding enzyme C-terminal domain-containing protein. | Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family. | 0.404 |
SFD77352.1 | SFF36086.1 | SAMN02745121_01510 | SAMN02745121_08376 | AMP-binding enzyme C-terminal domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.939 |
SFD77352.1 | SFF36120.1 | SAMN02745121_01510 | SAMN02745121_08379 | AMP-binding enzyme C-terminal domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.942 |
SFD94771.1 | SFD74979.1 | SAMN02745121_02377 | SAMN02745121_01346 | NAD(P)H-flavin reductase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.741 |
SFD94771.1 | SFD77352.1 | SAMN02745121_02377 | SAMN02745121_01510 | NAD(P)H-flavin reductase. | AMP-binding enzyme C-terminal domain-containing protein. | 0.785 |
SFD94771.1 | SFE22790.1 | SAMN02745121_02377 | SAMN02745121_03528 | NAD(P)H-flavin reductase. | anthraniloyl-CoA monooxygenase. | 0.806 |
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