Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFD54056.1 | SFD99185.1 | SAMN02745121_00509 | SAMN02745121_02563 | Protein ImuB. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.940 |
| SFD54056.1 | SFE06896.1 | SAMN02745121_00509 | SAMN02745121_02871 | Protein ImuB. | ATP-dependent DNA helicase, RecQ family/DNA topoisomerase III. | 0.874 |
| SFD54056.1 | SFE12485.1 | SAMN02745121_00509 | SAMN02745121_03064 | Protein ImuB. | Tetratricopeptide repeat-containing protein. | 0.511 |
| SFD54056.1 | SFE26769.1 | SAMN02745121_00509 | SAMN02745121_03633 | Protein ImuB. | Predicted 3'-5' exonuclease related to the exonuclease domain of PolB. | 0.977 |
| SFD54056.1 | SFE67992.1 | SAMN02745121_00509 | SAMN02745121_05156 | Protein ImuB. | Serine/threonine protein kinase. | 0.412 |
| SFD54056.1 | SFF02820.1 | SAMN02745121_00509 | SAMN02745121_06552 | Protein ImuB. | 5'-3' exonuclease. | 0.583 |
| SFD54056.1 | SFF33436.1 | SAMN02745121_00509 | SAMN02745121_08218 | Protein ImuB. | DNA polymerase III sliding clamp (beta) subunit, PCNA homolog. | 0.940 |
| SFD54056.1 | dinB | SAMN02745121_00509 | SAMN02745121_04554 | Protein ImuB. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.454 |
| SFD54056.1 | polA | SAMN02745121_00509 | SAMN02745121_02175 | Protein ImuB. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.583 |
| SFD54056.1 | polA-2 | SAMN02745121_00509 | SAMN02745121_07578 | Protein ImuB. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.583 |
| SFD99185.1 | SFD54056.1 | SAMN02745121_02563 | SAMN02745121_00509 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Protein ImuB. | 0.940 |
| SFD99185.1 | SFE06896.1 | SAMN02745121_02563 | SAMN02745121_02871 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | ATP-dependent DNA helicase, RecQ family/DNA topoisomerase III. | 0.906 |
| SFD99185.1 | SFE26769.1 | SAMN02745121_02563 | SAMN02745121_03633 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Predicted 3'-5' exonuclease related to the exonuclease domain of PolB. | 0.987 |
| SFD99185.1 | SFF02820.1 | SAMN02745121_02563 | SAMN02745121_06552 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 5'-3' exonuclease. | 0.995 |
| SFD99185.1 | dinB | SAMN02745121_02563 | SAMN02745121_04554 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.977 |
| SFD99185.1 | polA | SAMN02745121_02563 | SAMN02745121_02175 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.997 |
| SFD99185.1 | polA-2 | SAMN02745121_02563 | SAMN02745121_07578 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.996 |
| SFE06896.1 | SFD54056.1 | SAMN02745121_02871 | SAMN02745121_00509 | ATP-dependent DNA helicase, RecQ family/DNA topoisomerase III. | Protein ImuB. | 0.874 |
| SFE06896.1 | SFD99185.1 | SAMN02745121_02871 | SAMN02745121_02563 | ATP-dependent DNA helicase, RecQ family/DNA topoisomerase III. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.906 |
| SFE06896.1 | SFE12485.1 | SAMN02745121_02871 | SAMN02745121_03064 | ATP-dependent DNA helicase, RecQ family/DNA topoisomerase III. | Tetratricopeptide repeat-containing protein. | 0.997 |
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