Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE30184.1 | SFE41969.1 | SAMN02745121_03788 | SAMN02745121_04204 | Cell division protein FtsW; Belongs to the SEDS family. | Cyanophycin synthetase. | 0.686 |
SFE30184.1 | SFF14258.1 | SAMN02745121_03788 | SAMN02745121_07147 | Cell division protein FtsW; Belongs to the SEDS family. | D-alanine-D-alanine ligase. | 0.643 |
SFE30184.1 | ftsA | SAMN02745121_03788 | SAMN02745121_04084 | Cell division protein FtsW; Belongs to the SEDS family. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.821 |
SFE30184.1 | ftsQ | SAMN02745121_03788 | SAMN02745121_04085 | Cell division protein FtsW; Belongs to the SEDS family. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.943 |
SFE30184.1 | murC | SAMN02745121_03788 | SAMN02745121_06394 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.961 |
SFE30184.1 | murD | SAMN02745121_03788 | SAMN02745121_01892 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.924 |
SFE30184.1 | murF | SAMN02745121_03788 | SAMN02745121_01903 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.927 |
SFE30184.1 | murG | SAMN02745121_03788 | SAMN02745121_02380 | Cell division protein FtsW; Belongs to the SEDS family. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.953 |
SFE41969.1 | SFE30184.1 | SAMN02745121_04204 | SAMN02745121_03788 | Cyanophycin synthetase. | Cell division protein FtsW; Belongs to the SEDS family. | 0.686 |
SFE41969.1 | SFF14258.1 | SAMN02745121_04204 | SAMN02745121_07147 | Cyanophycin synthetase. | D-alanine-D-alanine ligase. | 0.859 |
SFE41969.1 | ftsA | SAMN02745121_04204 | SAMN02745121_04084 | Cyanophycin synthetase. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.865 |
SFE41969.1 | ftsQ | SAMN02745121_04204 | SAMN02745121_04085 | Cyanophycin synthetase. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.852 |
SFE41969.1 | murC | SAMN02745121_04204 | SAMN02745121_06394 | Cyanophycin synthetase. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.910 |
SFE41969.1 | murD | SAMN02745121_04204 | SAMN02745121_01892 | Cyanophycin synthetase. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.968 |
SFE41969.1 | murF | SAMN02745121_04204 | SAMN02745121_01903 | Cyanophycin synthetase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.967 |
SFE41969.1 | murG | SAMN02745121_04204 | SAMN02745121_02380 | Cyanophycin synthetase. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.900 |
SFE42549.1 | ftsQ | SAMN02745121_04231 | SAMN02745121_04085 | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.977 |
SFF14258.1 | SFE30184.1 | SAMN02745121_07147 | SAMN02745121_03788 | D-alanine-D-alanine ligase. | Cell division protein FtsW; Belongs to the SEDS family. | 0.643 |
SFF14258.1 | SFE41969.1 | SAMN02745121_07147 | SAMN02745121_04204 | D-alanine-D-alanine ligase. | Cyanophycin synthetase. | 0.859 |
SFF14258.1 | ftsA | SAMN02745121_07147 | SAMN02745121_04084 | D-alanine-D-alanine ligase. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.865 |
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