Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE39356.1 | SFE39380.1 | SAMN02745121_04086 | SAMN02745121_04087 | Hypothetical protein. | phytanoyl-CoA hydroxylase. | 0.448 |
SFE39356.1 | SFE39401.1 | SAMN02745121_04086 | SAMN02745121_04088 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.448 |
SFE39356.1 | ftsA | SAMN02745121_04086 | SAMN02745121_04084 | Hypothetical protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.428 |
SFE39356.1 | ftsQ | SAMN02745121_04086 | SAMN02745121_04085 | Hypothetical protein. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.428 |
SFE39380.1 | SFE39356.1 | SAMN02745121_04087 | SAMN02745121_04086 | phytanoyl-CoA hydroxylase. | Hypothetical protein. | 0.448 |
SFE39380.1 | SFE39401.1 | SAMN02745121_04087 | SAMN02745121_04088 | phytanoyl-CoA hydroxylase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.773 |
SFE39401.1 | SFE39356.1 | SAMN02745121_04088 | SAMN02745121_04086 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.448 |
SFE39401.1 | SFE39380.1 | SAMN02745121_04088 | SAMN02745121_04087 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | phytanoyl-CoA hydroxylase. | 0.773 |
ftsA | SFE39356.1 | SAMN02745121_04084 | SAMN02745121_04086 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Hypothetical protein. | 0.428 |
ftsA | ftsQ | SAMN02745121_04084 | SAMN02745121_04085 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.989 |
ftsQ | SFE39356.1 | SAMN02745121_04085 | SAMN02745121_04086 | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | Hypothetical protein. | 0.428 |
ftsQ | ftsA | SAMN02745121_04085 | SAMN02745121_04084 | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.989 |