Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD50832.1 | SFD77083.1 | SAMN02745121_00332 | SAMN02745121_01494 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Hypothetical protein. | 0.943 |
SFD50832.1 | SFD77792.1 | SAMN02745121_00332 | SAMN02745121_01537 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Signal transduction histidine kinase. | 0.875 |
SFD50832.1 | SFE12499.1 | SAMN02745121_00332 | SAMN02745121_03065 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Adenylate cyclase. | 0.942 |
SFD50832.1 | SFE41856.1 | SAMN02745121_00332 | SAMN02745121_04199 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Hypothetical protein. | 0.555 |
SFD50832.1 | SFE41885.1 | SAMN02745121_00332 | SAMN02745121_04200 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Signal transduction histidine kinase. | 0.464 |
SFD50832.1 | SFE43613.1 | SAMN02745121_00332 | SAMN02745121_04280 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | PAS domain S-box-containing protein. | 0.907 |
SFD50832.1 | SFF31518.1 | SAMN02745121_00332 | SAMN02745121_08104 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | HAMP domain-containing protein. | 0.943 |
SFD50832.1 | SFF46358.1 | SAMN02745121_00332 | SAMN02745121_09025 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Signal transduction histidine kinase. | 0.943 |
SFD77083.1 | SFD50832.1 | SAMN02745121_01494 | SAMN02745121_00332 | Hypothetical protein. | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | 0.943 |
SFD77083.1 | SFD77792.1 | SAMN02745121_01494 | SAMN02745121_01537 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
SFD77083.1 | SFE12485.1 | SAMN02745121_01494 | SAMN02745121_03064 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.932 |
SFD77083.1 | SFE12499.1 | SAMN02745121_01494 | SAMN02745121_03065 | Hypothetical protein. | Adenylate cyclase. | 0.955 |
SFD77083.1 | SFE41856.1 | SAMN02745121_01494 | SAMN02745121_04199 | Hypothetical protein. | Hypothetical protein. | 0.769 |
SFD77083.1 | SFE41885.1 | SAMN02745121_01494 | SAMN02745121_04200 | Hypothetical protein. | Signal transduction histidine kinase. | 0.906 |
SFD77083.1 | SFE43613.1 | SAMN02745121_01494 | SAMN02745121_04280 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
SFD77083.1 | SFF31518.1 | SAMN02745121_01494 | SAMN02745121_08104 | Hypothetical protein. | HAMP domain-containing protein. | 0.999 |
SFD77083.1 | SFF46358.1 | SAMN02745121_01494 | SAMN02745121_09025 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
SFD77792.1 | SFD50832.1 | SAMN02745121_01537 | SAMN02745121_00332 | Signal transduction histidine kinase. | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | 0.875 |
SFD77792.1 | SFD77083.1 | SAMN02745121_01537 | SAMN02745121_01494 | Signal transduction histidine kinase. | Hypothetical protein. | 0.999 |
SFD77792.1 | SFE12485.1 | SAMN02745121_01537 | SAMN02745121_03064 | Signal transduction histidine kinase. | Tetratricopeptide repeat-containing protein. | 0.763 |
page 1 of 5