STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE48444.1Hypothetical protein. (252 aa)    
Predicted Functional Partners:
SFE48463.1
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain.
 
  
 0.968
SFE48482.1
ATPase family associated with various cellular activities (AAA).
 
    0.943
SFE41181.1
Repeat domain-containing protein.
  
     0.629
SFD59211.1
Repeat domain-containing protein.
  
     0.623
SFE03775.1
Fibro-slime domain-containing protein.
  
     0.608
SFD76064.1
Fibro-slime domain-containing protein.
  
     0.606
SFE68298.1
Repeat domain-containing protein.
  
     0.601
SFF36425.1
Fibro-slime domain-containing protein.
  
     0.600
SFF17914.1
Repeat domain-containing protein.
  
     0.599
SFE10508.1
Protein of unknown function.
  
     0.585
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.