STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE49116.1FecR family protein. (1396 aa)    
Predicted Functional Partners:
SFD77083.1
Hypothetical protein.
    
 0.839
SFF31518.1
HAMP domain-containing protein.
    
 0.839
SFF46358.1
Signal transduction histidine kinase.
    
 0.839
SFD93617.1
Signal transduction histidine kinase.
    
 0.816
ribB
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.775
SFE30395.1
Hypothetical protein.
  
  
  0.773
SFE55314.1
Cytochrome c2.
  
     0.769
SFE26079.1
Vault protein inter-alpha-trypsin domain-containing protein.
  
     0.763
SFE55172.1
Putative metal-binding motif-containing protein.
  
     0.759
SFF02715.1
Hypothetical protein.
  
  
  0.758
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.