STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE49215.1Glycosyltransferase involved in cell wall bisynthesis. (414 aa)    
Predicted Functional Partners:
SFE79058.1
Hypothetical protein.
   
 0.837
SFE16366.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 0.828
SFD66745.1
UDP-N-Acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.805
SFD66732.1
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.795
SFE49197.1
Low affinity Fe/Cu permease.
       0.773
SFD66714.1
Uncharacterized conserved protein, heparinase superfamily.
     0.749
SFE06896.1
ATP-dependent DNA helicase, RecQ family/DNA topoisomerase III.
    
 
 0.699
SFD73474.1
Capsular exopolysaccharide family.
 
 
 0.684
SFE65820.1
UDP-glucose dehydrogenase.
 
 
 0.643
SFD83927.1
Maltooligosyltrehalose trehalohydrolase.
   
 0.626
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.