STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE52850.1Myxococcus cysteine-rich repeat-containing protein. (445 aa)    
Predicted Functional Partners:
SFE76135.1
Hypothetical protein.
  
     0.760
SFD85947.1
Hypothetical protein.
  
     0.753
SFF46533.1
Hypothetical protein.
  
     0.753
SFF46834.1
Hypothetical protein.
  
     0.751
SFF36787.1
Hypothetical protein.
  
     0.737
SFF22332.1
Hypothetical protein.
  
     0.730
SFF01403.1
Hypothetical protein.
  
     0.722
SFE78516.1
Hypothetical protein.
  
     0.718
SFE95728.1
Beta-propeller repeat-containing protein.
  
     0.703
SFF44947.1
Hypothetical protein.
  
     0.677
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.