STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE52954.1Ethanolamine ammonia-lyase light chain. (746 aa)    
Predicted Functional Partners:
SFD79210.1
Alcohol dehydrogenase, class IV.
    
 0.852
SFD63754.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.819
SFF26821.1
Myo-inositol-1(or 4)-monophosphatase.
    
  0.807
SFF12789.1
4-aminobutyrate aminotransferase.
  
 
 0.798
SFD52140.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.795
SFD74906.1
Coniferyl-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.795
SFD82790.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
  
 
 0.795
SFE02202.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.795
SFE29177.1
3,4-dehydroadipyl-CoA semialdehyde dehydrogenase.
  
 
 0.795
SFE32827.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.795
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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