STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE53204.1Protein of unknown function. (439 aa)    
Predicted Functional Partners:
SFE53222.1
Protein of unknown function.
 
     0.937
SFE43263.1
Protein of unknown function.
 
     0.779
SFD75196.1
Hypothetical protein.
  
     0.752
SFF34458.1
Long-chain fatty acid transport protein.
  
     0.748
SFE89542.1
Cysteine-rich secretory protein family protein.
  
     0.738
SFD75209.1
Hypothetical protein.
  
     0.709
SFE00822.1
PDZ domain-containing protein.
  
     0.656
SFE23113.1
Helix-turn-helix.
  
     0.653
SFE71935.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.650
SFE65005.1
Hypothetical protein.
  
     0.644
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: medium (76%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.