STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE53272.1Phenylpropionate dioxygenase, large terminal subunit. (346 aa)    
Predicted Functional Partners:
SFE86655.1
Hypothetical protein.
    
 0.850
SFD94771.1
NAD(P)H-flavin reductase.
    
 0.849
SFE53257.1
Hypothetical protein.
       0.773
SFE53236.1
Hypothetical protein.
       0.648
SFE77804.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
  
  
  0.632
SFD83280.1
Aromatic ring-opening dioxygenase, catalytic subunit, LigB family.
    
 0.628
SFE97855.1
Phenylpropionate dioxygenase, large terminal subunit.
 
  
 
0.540
SFD46580.1
Rieske [2Fe-2S] domain-containing protein.
 
  
 
0.531
SFE53293.1
Hypothetical protein.
       0.527
SFD95210.1
Hypothetical protein.
 
  
 
0.524
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.