STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE65995.1Hypothetical protein. (455 aa)    
Predicted Functional Partners:
SFE66011.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.955
SFE21950.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
  
 0.822
SFE66622.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.808
SFD67900.1
Outer membrane protein TolC.
  
 0.772
SFD82889.1
Outer membrane protein TolC.
  
 0.772
SFD64502.1
Outer membrane protein, cobalt-zinc-cadmium efflux system.
  
 0.749
SFD76716.1
Outer membrane protein TolC.
  
 0.749
SFE09176.1
Outer membrane protein, cobalt-zinc-cadmium efflux system.
  
 0.749
SFE71685.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
 0.749
SFE97096.1
Outer membrane efflux protein.
  
 0.749
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.