STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE72446.1HlyD family secretion protein. (319 aa)    
Predicted Functional Partners:
SFE97800.1
AcrB/AcrD/AcrF family protein.
 
 0.914
SFE72468.1
Erythromycin esterase homolog.
 
     0.890
SFE72433.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
 
    0.849
SFE72413.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
  0.828
SFD77629.1
Hypothetical protein.
  
     0.769
SFF03881.1
Surface antigen.
  
     0.750
SFE90911.1
SPFH domain / Band 7 family protein.
  
     0.738
SFF40959.1
Glycosyl transferase family 2.
  
  
  0.732
SFE87029.1
Protein of unknown function.
  
     0.730
SFE72490.1
SPASM domain peptide maturase, grasp-with-spasm system.
       0.714
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.