Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD57577.1 | SFE82182.1 | SAMN02745121_00687 | SAMN02745121_05647 | seryl-tRNA synthetase. | glycyl-tRNA synthetase. | 0.731 |
SFD57577.1 | argS | SAMN02745121_00687 | SAMN02745121_01498 | seryl-tRNA synthetase. | arginyl-tRNA synthetase. | 0.719 |
SFD57577.1 | asnS | SAMN02745121_00687 | SAMN02745121_02483 | seryl-tRNA synthetase. | asparaginyl-tRNA synthetase. | 0.541 |
SFD57577.1 | ileS | SAMN02745121_00687 | SAMN02745121_01213 | seryl-tRNA synthetase. | Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. | 0.584 |
SFD57577.1 | leuS | SAMN02745121_00687 | SAMN02745121_08197 | seryl-tRNA synthetase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.516 |
SFD57577.1 | tyrS | SAMN02745121_00687 | SAMN02745121_03632 | seryl-tRNA synthetase. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.463 |
SFD57577.1 | valS | SAMN02745121_00687 | SAMN02745121_00722 | seryl-tRNA synthetase. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.775 |
SFD58169.1 | SFE82182.1 | SAMN02745121_00720 | SAMN02745121_05647 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | glycyl-tRNA synthetase. | 0.692 |
SFE82182.1 | SFD57577.1 | SAMN02745121_05647 | SAMN02745121_00687 | glycyl-tRNA synthetase. | seryl-tRNA synthetase. | 0.731 |
SFE82182.1 | SFD58169.1 | SAMN02745121_05647 | SAMN02745121_00720 | glycyl-tRNA synthetase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.692 |
SFE82182.1 | SFE82197.1 | SAMN02745121_05647 | SAMN02745121_05648 | glycyl-tRNA synthetase. | Fe-S cluster biosynthesis and repair protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.773 |
SFE82182.1 | argS | SAMN02745121_05647 | SAMN02745121_01498 | glycyl-tRNA synthetase. | arginyl-tRNA synthetase. | 0.704 |
SFE82182.1 | asnS | SAMN02745121_05647 | SAMN02745121_02483 | glycyl-tRNA synthetase. | asparaginyl-tRNA synthetase. | 0.764 |
SFE82182.1 | ileS | SAMN02745121_05647 | SAMN02745121_01213 | glycyl-tRNA synthetase. | Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. | 0.807 |
SFE82182.1 | leuS | SAMN02745121_05647 | SAMN02745121_08197 | glycyl-tRNA synthetase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.828 |
SFE82182.1 | proB | SAMN02745121_05647 | SAMN02745121_03128 | glycyl-tRNA synthetase. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.671 |
SFE82182.1 | tyrS | SAMN02745121_05647 | SAMN02745121_03632 | glycyl-tRNA synthetase. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.744 |
SFE82182.1 | valS | SAMN02745121_05647 | SAMN02745121_00722 | glycyl-tRNA synthetase. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.685 |
SFE82197.1 | SFE82182.1 | SAMN02745121_05648 | SAMN02745121_05647 | Fe-S cluster biosynthesis and repair protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | glycyl-tRNA synthetase. | 0.773 |
argS | SFD57577.1 | SAMN02745121_01498 | SAMN02745121_00687 | arginyl-tRNA synthetase. | seryl-tRNA synthetase. | 0.719 |
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