STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE85478.1RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily. (209 aa)    
Predicted Functional Partners:
SFE02781.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.774
SFE82741.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.774
SFD78541.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.772
SFE02076.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.767
SFD90783.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.763
SFE82836.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.761
SFF22591.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.749
SFD48277.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.742
SFE66813.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.742
SFE32947.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.725
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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