STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE87195.1TPR repeat; Hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives. (391 aa)    
Predicted Functional Partners:
SFD48767.1
TPR repeat; Hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives.
  
     0.755
SFE87175.1
Hypothetical protein.
       0.561
SFD95341.1
Sel1 repeat-containing protein.
  
     0.514
SFF04691.1
Myxococcus cysteine-rich repeat-containing protein.
  
     0.439
SFD49112.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
  
 
   0.433
SFF02803.1
ATPase family associated with various cellular activities (AAA).
   
 0.424
SFF26034.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
   
 0.424
SFE12485.1
Tetratricopeptide repeat-containing protein.
 
 
   0.419
SFE25266.1
Hypothetical protein.
  
     0.415
SFF12242.1
Tetratricopeptide repeat-containing protein.
  
 
   0.405
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.