STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE87380.1Myxococcus cysteine-rich repeat-containing protein. (819 aa)    
Predicted Functional Partners:
SFD54997.1
HEXXH motif-containing protein.
  
     0.730
SFD51017.1
Hypothetical protein.
  
     0.708
SFF48290.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
  
     0.704
SFD48880.1
His-Xaa-Ser system radical SAM maturase HxsB.
  
     0.701
SFE46442.1
Hypothetical protein.
  
     0.661
SFF02889.1
Hypothetical protein.
  
     0.657
SFE07323.1
Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain.
  
     0.653
SFF14486.1
Maltoporin (phage lambda and maltose receptor).
  
     0.652
SFF12242.1
Tetratricopeptide repeat-containing protein.
  
     0.648
SFE17042.1
Alpha/beta hydrolase family protein.
  
     0.644
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.