STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE98126.1Biopolymer transport protein ExbD/TolR. (177 aa)    
Predicted Functional Partners:
SFD86254.1
Outer membrane receptor proteins, mostly Fe transport.
 
 0.944
SFE83615.1
TonB family C-terminal domain-containing protein.
 
 0.938
SFE98101.1
Biopolymer transport protein ExbB/TolQ.
 
  0.909
SFE56628.1
Outer membrane receptor for ferrienterochelin and colicins.
 
 0.885
SFE39283.1
TonB-dependent Receptor Plug Domain.
 
 0.882
SFE71364.1
TonB-dependent Receptor Plug Domain.
 
 0.882
SFE16217.1
TonB-dependent Receptor Plug Domain.
 
 0.879
SFD92672.1
Hypothetical protein.
 
 0.877
SFE00375.1
TonB-dependent Receptor Plug Domain.
 
 0.874
SFE16174.1
TonB-dependent Receptor Plug Domain.
 
 0.873
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.