STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF00774.1Ribosomal protein S18 acetylase RimI. (159 aa)    
Predicted Functional Partners:
SFD91576.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
  
 0.794
SFF12789.1
4-aminobutyrate aminotransferase.
  
 
 0.777
SFE93531.1
Dihydroneopterin aldolase.
  
 
  0.548
SFF35767.1
Tetratrico peptide repeat-containing protein.
  
     0.452
SFE91619.1
Streptomycin 6-kinase.
  
     0.444
SFE20623.1
Transcriptional regulator, XRE family with cupin sensor.
    
 0.435
SFE53912.1
Transcriptional regulator, XRE family with cupin sensor.
    
 0.435
SFD59873.1
Zn-dependent metalloprotease.
  
     0.408
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.