STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF09413.1Hypothetical protein. (253 aa)    
Predicted Functional Partners:
SFF09428.1
Conserved hypothetical phage tail region protein.
       0.675
SFF09439.1
Hypothetical protein.
       0.630
SFF09350.1
Phage protein D.
       0.487
SFF09365.1
Hypothetical protein.
       0.487
SFF09403.1
Meckel syndrome type 1 protein.
       0.465
SFF09331.1
Hypothetical protein.
       0.453
SFF09310.1
Gene 25-like lysozyme.
       0.445
SFF09389.1
Hypothetical protein.
       0.434
SFF09298.1
Putative baseplate assembly protein.
       0.429
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.