STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF11091.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
SFE39164.1
Ca2+-binding protein, EF-hand superfamily.
   
 0.898
SFF11078.1
Hypothetical protein.
       0.773
SFF22224.1
Hypothetical protein.
 
     0.773
SFE67418.1
Hypothetical protein.
   
 0.731
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.717
SFF08706.1
Hypothetical protein.
  
 
 0.693
SFF33813.1
Methylthioribulose-1-phosphate dehydratase.
  
 
  0.690
SFF33975.1
Ankyrin repeat-containing protein.
   
 0.673
SFD76392.1
ERI1 exoribonuclease 3.
  
 
   0.651
SFE49101.1
Uridine kinase.
    
 0.642
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.