STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF12010.1Hypothetical protein. (307 aa)    
Predicted Functional Partners:
SFF37652.1
Hypothetical protein.
  
     0.561
SFD64669.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
    0.537
SFD57856.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.461
SFF11996.1
Hypothetical protein.
       0.455
SFE02276.1
Protein of unknown function.
  
     0.439
SFD83867.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.432
SFF12018.1
Surface antigen.
       0.428
SFF12032.1
Family of unknown function.
       0.428
SFF20896.1
PAS domain-containing protein.
  
     0.419
SFE55861.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.