STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF16776.1Acetyltransferase (GNAT) family protein. (273 aa)    
Predicted Functional Partners:
SFD91576.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
  
 0.794
SFF12789.1
4-aminobutyrate aminotransferase.
  
 
 0.777
SFE70795.1
Hypothetical protein.
  
     0.727
SFF16763.1
Protein of unknown function.
       0.718
SFD76615.1
Hypothetical protein.
  
     0.697
SFE77697.1
Pectate lyase superfamily protein.
  
     0.689
SFF14486.1
Maltoporin (phage lambda and maltose receptor).
  
     0.689
SFF10705.1
Alpha/beta hydrolase fold.
  
     0.654
SFE42425.1
Protein of unknown function.
  
     0.650
SFD54997.1
HEXXH motif-containing protein.
  
     0.648
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.