STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF19555.1Lanthionine synthetase C-like protein. (393 aa)    
Predicted Functional Partners:
SFF19539.1
Thiopeptide-type bacteriocin biosynthesis domain-containing protein.
 
   
 0.914
SFF19580.1
Lantibiotic dehydratase, C terminus.
 
   
 0.843
SFD77629.1
Hypothetical protein.
  
     0.738
SFF22114.1
HlyD family secretion protein.
  
     0.726
SFE72446.1
HlyD family secretion protein.
  
     0.713
SFF44489.1
Tetratricopeptide repeat-containing protein.
  
     0.670
SFF03881.1
Surface antigen.
  
     0.652
SFE95698.1
Myxococcales GC_trans_RRR domain-containing protein.
  
     0.648
SFE42264.1
Myxococcus cysteine-rich repeat-containing protein.
  
     0.644
SFD47237.1
Tetratricopeptide repeat-containing protein.
  
     0.637
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.