STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF26777.1Outer membrane protein OmpA. (275 aa)    
Predicted Functional Partners:
SFF22152.1
Chemotaxis protein MotB.
  
 
 0.819
SFF26769.1
Protein of unknown function.
       0.723
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.706
SFF00728.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.694
SFF15889.1
Type III secretion protein R.
  
     0.656
SFD53800.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 
   0.643
SFE81470.1
Type III secretion protein V.
  
     0.638
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.606
SFD77383.1
Chemotaxis protein MotB.
  
 
0.554
SFF25678.1
Transglycosylase SLT domain-containing protein.
  
     0.545
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.