STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF28752.1Trypsin. (446 aa)    
Predicted Functional Partners:
SFE47436.1
Repeat domain-containing protein.
  
     0.773
SFF28766.1
Hypothetical protein.
       0.773
SFD84853.1
HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase.
  
     0.526
SFE90254.1
Low-density lipoprotein receptor domain class A.
  
     0.526
SFF12492.1
Low-density lipoprotein receptor domain class A.
  
     0.513
SFD46889.1
Zinc carboxypeptidase.
  
     0.472
SFE48198.1
Heme NO binding associated; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
     0.471
SFE25559.1
Serine/threonine-protein phosphatase PGAM5.
  
     0.462
SFE70610.1
Lanthionine synthetase C-like protein.
  
     0.444
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.