STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF35030.1Polyhydroxyalkanoate synthase. (383 aa)    
Predicted Functional Partners:
SFF35058.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.898
SFD67629.1
Poly(3-hydroxybutyrate) depolymerase.
 
  
 0.871
SFE65370.1
3-hydroxyacyl-CoA dehydrogenase / 3a,7a,12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase.
  
 
 0.868
SFD59354.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
     
 0.840
SFD74979.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
     
 0.840
SFE25730.1
Enoyl-CoA hydratase/carnithine racemase.
     
 0.819
SFF35040.1
Hypothetical protein.
       0.782
SFF35052.1
fatty-acyl-CoA synthase.
    
  0.773
SFD67660.1
Poly(3-hydroxybutyrate) depolymerase.
 
  
 0.714
SFE86655.1
Hypothetical protein.
   
 
  0.714
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.