STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF35284.1CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein. (567 aa)    
Predicted Functional Partners:
SFF47886.1
SIR2-like domain-containing protein.
  
     0.517
SFE43601.1
Thioredoxin-like.
  
     0.509
SFE25288.1
Tetratricopeptide repeat-containing protein.
 
     0.504
ribB
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.489
SFD47237.1
Tetratricopeptide repeat-containing protein.
  
     0.450
SFE73578.1
Putative peptidoglycan binding domain-containing protein.
  
     0.438
SFE22515.1
Oxysterol 7-alpha-hydroxylase.
  
     0.427
SFE49502.1
Cysteine-rich secretory protein family protein.
  
     0.421
SFE86053.1
Cell wall assembly regulator SMI1.
  
     0.416
SFF23793.1
N-terminal domain of Peptidase_S41.
  
     0.413
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.