STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF38141.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
SFF38152.1
Hypothetical protein.
       0.773
SFF38165.1
Hypothetical protein.
       0.773
SFF38181.1
Hypothetical protein.
       0.773
SFE95177.1
Protein of unknown function.
  
     0.760
SFF45466.1
Spore photoproduct lyase family protein.
 
     0.747
SFF38126.1
Hypothetical protein.
       0.737
SFE95221.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
 
   0.690
SFF38195.1
Hypothetical protein.
 
     0.687
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
  0.635
SFD94276.1
Heme oxygenase.
  
     0.444
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.