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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbUStage II sporulation protein E; KEGG: awo:Awo_c16830 3.2e-22 phosphoserine phosphatase; Psort location: Cytoplasmic, score: 7.50. (365 aa)    
Predicted Functional Partners:
rsbV
STAS domain protein; KEGG: ter:Tery_1523 1.4e-06 anti-sigma-factor antagonist and sugar transfersase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.968
spoIIAB
KEGG: fma:FMG_1043 4.8e-19 hypothetical protein; K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.927
sigB
Putative RNA polymerase sigma-B factor; KEGG: cpy:Cphy_2685 4.3e-25 RNA polymerase sigma 28 subunit FliA/WhiG K02405; Psort location: Cytoplasmic, score: 9.97; Belongs to the sigma-70 factor family.
 
 
 0.817
KXA28532.1
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 1.2e-111 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 7.50.
   
  
 0.817
rsbW
Hypothetical protein; KEGG: cdl:CDR20291_3551 1.6e-09 rsbW; anti-sigma-B factor (serine-protein kinase); K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.739
rlmL
Hypothetical protein; KEGG: apr:Apre_1421 1.0e-103 putative RNA methylase; K07444 putative N6-adenine-specific DNA methylase; Psort location: Cytoplasmic, score: 7.50; Belongs to the methyltransferase superfamily.
 
     0.718
KXA31478.1
Tetratricopeptide repeat protein; KEGG: btl:BALH_3160 6.2e-05 response regulator aspartate phosphatase K06361; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.557
nrdH
Hypothetical protein; KEGG: mpl:Mpal_0406 8.3e-07 glutaredoxin; K03387 alkyl hydroperoxide reductase subunit F; Psort location: Cytoplasmic, score: 7.50.
 
     0.489
KXA31881.1
KEGG: fma:FMG_0046 4.8e-42 superoxide reductase; K05919 superoxide reductase.
       0.458
prkC
Putative serine/threonine-protein kinase PrkC; KEGG: ctc:CTC01225 4.9e-104 serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.452
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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