STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31898.14Fe-4S binding domain protein; KEGG: hpk:Hprae_1780 1.9e-134 ferredoxin hydrogenase; Psort location: Cytoplasmic, score: 7.50. (501 aa)    
Predicted Functional Partners:
KXA31897.1
Hypothetical protein; KEGG: dbr:Deba_0784 8.4e-06 NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.981
porA
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.805
gltD
Glutamate synthase; KEGG: clj:CLJU_c37240 2.7e-261 glutamate synthase K00266; Psort location: Cytoplasmic, score: 9.97.
   
 0.706
KXA31896.1
Cyclic nucleotide-binding domain protein; KEGG: fma:FMG_1494 0.00029 pyruvate-formate-lyase-activating enzyme; K04069 pyruvate formate lyase activating enzyme; Psort location: Cytoplasmic, score: 7.50.
 
     0.615
KXA28533.1
Iron-only hydrogenase maturation rSAM protein HydE; KEGG: sri:SELR_19500 5.2e-84 hypothetical protein; K01012 biotin synthetase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.583
KXA28531.1
Hydrogenase maturation GTPase HydF; KEGG: cce:Ccel_3486 3.4e-13 tRNA modification GTPase TrmE; K03650 tRNA modification GTPase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.582
rnfB_2
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
     
0.531
KXA28532.1
Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 1.2e-111 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.527
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.505
rpsI
Ribosomal protein S9; KEGG: apb:SAR116_0492 3.3e-27 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS9 family.
       0.489
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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