Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cysAKEGG: sgo:SGO_2099 1.2e-52 ABC transporter ATP-binding protein K15600; Psort location: CytoplasmicMembrane, score: 8.78. (250 aa)    
Predicted Functional Partners:
ssuC
KEGG: apb:SAR116_1967 4.4e-32 ABC transporter permease K15599; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.989
KXA31789.1
NMT1/THI5-like protein; KEGG: mah:MEALZ_2389 9.6e-20 histidine kinase; K07679 two-component system, NarL family, sensor histidine kinase EvgS; Psort location: CytoplasmicMembrane, score: 9.55.
 
 
 0.988
KXA31787.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.951
KXA31877.1
KEGG: pfl:PFL_0270 2.9e-28 tauC; taurine ABC transporter permease K15552; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.939
gsiA_1
Putative oligopeptide ABC transporter, ATP-binding protein OppD; KEGG: cle:Clole_3784 8.4e-93 peptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 9.96.
 
     
0.900
macB_4
Efflux ABC transporter, permease protein; KEGG: car:cauri_0317 8.2e-63 yknZ; Macrolide export ATP-binding/permease macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
      0.900
KXA31879.1
NMT1/THI5-like protein; KEGG: pfl:PFL_0272 2.3e-14 tauA; taurine ABC transporter periplasmic taurine-binding protein K15551.
 
 
 0.843
yecS_1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 9.6e-37 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 10.00.
      0.734
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.483
livF
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_2121 7.4e-30 sulfate ABC transporter ATPase K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
     0.461
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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