STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kipITIGR00370 family protein; KEGG: fnu:FN0437 9.1e-80 allophanate hydrolase; Psort location: Cytoplasmic, score: 7.50. (248 aa)    
Predicted Functional Partners:
KXA31794.1
Biotin-dependent carboxylase domain protein; KEGG: fnu:FN0436 8.8e-82 urea carboxylase; Psort location: Cytoplasmic, score: 7.50.
 
 0.999
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 0.997
KXA31795.1
Hypothetical protein; KEGG: cnc:CNE_2c17030 3.0e-72 alpH; allophanate hydrolase AlpH; Psort location: Cytoplasmic, score: 7.50; Belongs to the D-glutamate cyclase family.
 
    0.925
KXA31792.1
Transporter, branched chain amino acid:cation symporter family protein; KEGG: bqy:MUS_0397 3.6e-108 ycsG; argininosuccinate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.908
KXA29690.1
Putative acetyl-CoA carboxylase, biotin carboxylase subunit; KEGG: cbi:CLJ_B3925 1.9e-118 accC; biotin carboxylase K01961; Psort location: Cytoplasmic, score: 7.50.
 
    0.827
kdgR
IclR helix-turn-helix protein; KEGG: hiq:CGSHiGG_08780 4.4e-16 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 7.50.
  
    0.648
KXA28632.1
IclR helix-turn-helix protein; KEGG: cnc:CNE_2c17880 8.3e-09 mdlB; (S)-mandelate dehydrogenase MdlB; Psort location: Cytoplasmic, score: 7.50.
  
    0.648
KXA31796.1
Hypothetical protein.
       0.489
cysA
KEGG: sgo:SGO_2099 1.2e-52 ABC transporter ATP-binding protein K15600; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.488
KXA31789.1
NMT1/THI5-like protein; KEGG: mah:MEALZ_2389 9.6e-20 histidine kinase; K07679 two-component system, NarL family, sensor histidine kinase EvgS; Psort location: CytoplasmicMembrane, score: 9.55.
     
 0.487
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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