STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ymdBMacro domain protein; KEGG: bde:BDP_1359 2.0e-29 ATPase; Psort location: Cytoplasmic, score: 7.50. (170 aa)    
Predicted Functional Partners:
draG
ADP-ribosylglycohydrolase; KEGG: ssa:SSA_2189 2.5e-77 hypothetical protein; K05521 ADP-ribosylglycohydrolase; Psort location: Cytoplasmic, score: 7.50.
    
 0.917
rarA
ATPase, AAA family; KEGG: ava:Ava_B0112 1.6e-105 recombination factor protein RarA/unknown domain fusion protein K07478; Psort location: Cytoplasmic, score: 7.50.
      0.863
cmk
Cytidylate kinase; KEGG: tte:TTE1350 8.3e-54 cmk; cytidylate kinase; K00945 cytidylate kinase; Psort location: Cytoplasmic, score: 9.97.
      0.702
znuB_2
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 3.0e-26 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
      0.631
mleN_6
Na+/H+ antiporter family protein; KEGG: ebe:B21_04152 0.0022 gntP; GntP Gluconate Gnt transporter K03299; Psort location: CytoplasmicMembrane, score: 10.00.
       0.505
KXA31799.1
Hypothetical protein; KEGG: efu:HMPREF0351_11193 2.7e-55 dihydrodipicolinate synthase/N-acetylneuraminate lyase; Psort location: Cytoplasmic, score: 7.50.
     
 0.503
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.