STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31813.1Branched-chain amino acid ABC transporter, permease protein; KEGG: vsa:VSAL_I1370 7.8e-19 rbsC; ribose ABC transporter permease protein K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (289 aa)    
Predicted Functional Partners:
KXA31812.1
ABC transporter substrate binding protein; KEGG: abu:Abu_0035 0.00013 two-component sensor histidine kinase.
    0.991
KXA30940.1
KEGG: pfe:PSF113_4222 0.0021 abc transport system substrate-binding protein; Psort location: Cytoplasmic, score: 7.50.
    0.984
ssuB
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_0695 9.0e-57 phosphonate-transporting ATPase K05833; Psort location: CytoplasmicMembrane, score: 9.51.
    0.980
KXA31811.1
ABC transporter substrate binding protein.
    0.973
metN2
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_0695 2.3e-65 phosphonate-transporting ATPase K05833; Psort location: CytoplasmicMembrane, score: 8.78.
    0.933
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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