STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31852.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (229 aa)    
Predicted Functional Partners:
KXA31850.1
UBA/TS-N domain protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.857
KXA31851.1
RNA methyltransferase, TrmH family; KEGG: ctc:CTC02279 9.9e-35 23S rRNA methyltransferase K03437; Psort location: Cytoplasmic, score: 7.50.
       0.795
hemZ_2
Radical SAM protein family; KEGG: ctc:CTC01244 1.1e-76 oxygen-independent coproporphyrinogen III oxidase K00540; Psort location: Cytoplasmic, score: 7.50.
 
     0.782
KXA31478.1
Tetratricopeptide repeat protein; KEGG: btl:BALH_3160 6.2e-05 response regulator aspartate phosphatase K06361; Psort location: Cytoplasmic, score: 7.50.
  
    0.743
KXA28994.1
DnaD domain protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.727
KXA31700.1
Hypothetical protein.
  
     0.723
alkA
KEGG: apr:Apre_1385 4.4e-87 8-oxoguanine DNA glycosylase; K03660 N-glycosylase/DNA lyase; Psort location: Cytoplasmic, score: 7.50.
  
     0.695
dnaI_1
Putative DNA replication protein DnaC; KEGG: aae:aq_2053 0.00047 recG; ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG; Psort location: Cytoplasmic, score: 7.50.
  
     0.662
KXA31698.1
KEGG: bst:GYO_0743 1.1e-07 caax amino protease family K07052; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.616
KXA29559.1
Putative membrane fusion protein; KEGG: edi:EDI_024680 8.6e-05 GRIP domain-containing protein RUD3; Psort location: Cytoplasmic, score: 7.50.
 
     0.602
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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