STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31768.1Peptidase family T4; KEGG: mul:MUL_3929 4.4e-48 dmpA; L-aminopeptidase/D-esterase DmpA; K01567. (320 aa)    
Predicted Functional Partners:
panT
Hypothetical protein; KEGG: sai:Saci_0093 7.2e-06 UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase K01001; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.786
coaX_1
Putative pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.648
KXA31767.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.453
yadS
Hypothetical protein; KEGG: bqy:MUS_3662 1.5e-24 yvgT; thioredoxin reductase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.443
trpS
tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.428
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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