Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXA31668.1DNA-binding helix-turn-helix protein; KEGG: cce:Ccel_3317 2.6e-07 XRE family transcriptional regulator; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50. (121 aa)    
Predicted Functional Partners:
KXA31669.1
Hypothetical protein; KEGG: cae:SMB_G0504 0.00061 PemK family DNA-binding protein; K07171 mRNA interferase; Psort location: Cytoplasmic, score: 7.50.
       0.737
KXA31667.1
Transcriptional regulator, PvuIIC family protein; KEGG: apb:SAR116_1706 7.3e-05 DNA-binding protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.563
KXA31670.1
Toxin-antitoxin system, toxin component domain protein; KEGG: bmf:BAB1_0270 4.7e-06 zinc-dependent metallopeptidase K01417; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.561
KXA30997.1
DNA-binding helix-turn-helix protein; KEGG: clj:CLJU_c36670 1.2e-08 transcriptional regulator; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50.
 
     0.503
KXA28969.1
Baseplate J-like protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.414
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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