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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31670.1Toxin-antitoxin system, toxin component domain protein; KEGG: bmf:BAB1_0270 4.7e-06 zinc-dependent metallopeptidase K01417; Psort location: Cytoplasmic, score: 7.50. (180 aa)    
Predicted Functional Partners:
KXA31671.1
Hypothetical protein.
       0.698
KXA31672.1
Hypothetical protein.
       0.634
KXA31668.1
DNA-binding helix-turn-helix protein; KEGG: cce:Ccel_3317 2.6e-07 XRE family transcriptional regulator; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.553
KXA29496.1
Hypothetical protein; KEGG: sds:SDEG_0534 3.1e-08 ATPase K06915; Psort location: Cytoplasmic, score: 7.50.
 
     0.502
KXA31673.1
Site-specific recombinase, phage integrase family; KEGG: pfe:PSF113_1062 4.1e-07 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.487
KXA29539.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.472
KXA29537.1
RecF/RecN/SMC protein; KEGG: bce:BC1852 1.2e-29 exonuclease SbcC K03546.
  
     0.470
KXA29536.1
Ser/Thr phosphatase family protein; KEGG: bce:BC1857 2.3e-49 exonuclease SbcD K03547; Psort location: Cytoplasmic, score: 7.50.
 
     0.443
KXA31669.1
Hypothetical protein; KEGG: cae:SMB_G0504 0.00061 PemK family DNA-binding protein; K07171 mRNA interferase; Psort location: Cytoplasmic, score: 7.50.
       0.437
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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