KXA31693.1 protein (Peptoniphilus harei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KXA31693.1

Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (173 aa)

Predicted Functional Partners:

ecfT

0.755

ecfA2_1

0.753

ecfA1_4

0.749

KXA31488.1

0.643

KXA30169.1

0.643

KXA29467.1

0.643

KXA31411.1

0.590

thrC_5

0.544

thrA

0.525

hom_2

0.513

Your Current Organism:

Peptoniphilus harei

NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KXA29467.1	KXA31411.1	HMPREF3229_01091	HMPREF3229_00395	Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 0.00013 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 9.55.	Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.775
KXA29467.1	KXA31693.1	HMPREF3229_01091	HMPREF3229_00222	Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 0.00013 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 9.55.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.643
KXA29467.1	ecfA1_4	HMPREF3229_01091	HMPREF3229_00772	Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 0.00013 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 9.55.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.757
KXA29467.1	ecfA2_1	HMPREF3229_01091	HMPREF3229_00773	Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 0.00013 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 9.55.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.757
KXA30169.1	KXA31693.1	HMPREF3229_01002	HMPREF3229_00222	Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 2.0e-11 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.643
KXA30169.1	ecfA1_4	HMPREF3229_01002	HMPREF3229_00772	Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 2.0e-11 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.757
KXA30169.1	ecfA2_1	HMPREF3229_01002	HMPREF3229_00773	Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 2.0e-11 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.757
KXA31411.1	KXA29467.1	HMPREF3229_00395	HMPREF3229_01091	Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 0.00013 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 9.55.	0.775
KXA31411.1	KXA31693.1	HMPREF3229_00395	HMPREF3229_00222	Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.590
KXA31411.1	ecfA1_4	HMPREF3229_00395	HMPREF3229_00772	Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.748
KXA31411.1	ecfA2_1	HMPREF3229_00395	HMPREF3229_00773	Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.748
KXA31488.1	KXA31693.1	HMPREF3229_00377	HMPREF3229_00222	Cobalt transport protein; KEGG: bya:BANAU_0146 4.1e-09 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.643
KXA31488.1	ecfA1_4	HMPREF3229_00377	HMPREF3229_00772	Cobalt transport protein; KEGG: bya:BANAU_0146 4.1e-09 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.757
KXA31488.1	ecfA2_1	HMPREF3229_00377	HMPREF3229_00773	Cobalt transport protein; KEGG: bya:BANAU_0146 4.1e-09 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.757
KXA31693.1	KXA29467.1	HMPREF3229_00222	HMPREF3229_01091	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 0.00013 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 9.55.	0.643
KXA31693.1	KXA30169.1	HMPREF3229_00222	HMPREF3229_01002	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 2.0e-11 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.	0.643
KXA31693.1	KXA31411.1	HMPREF3229_00222	HMPREF3229_00395	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.590
KXA31693.1	KXA31488.1	HMPREF3229_00222	HMPREF3229_00377	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt transport protein; KEGG: bya:BANAU_0146 4.1e-09 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.	0.643
KXA31693.1	ecfA1_4	HMPREF3229_00222	HMPREF3229_00772	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.749
KXA31693.1	ecfA2_1	HMPREF3229_00222	HMPREF3229_00773	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.753