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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31715.1KEGG: crd:CRES_0317 3.2e-08 ABC transporter ATP-binding protein/permease K02004; Psort location: CytoplasmicMembrane, score: 10.00. (833 aa)    
Predicted Functional Partners:
lolD_4
ABC transporter, ATP-binding protein; KEGG: cle:Clole_0679 1.2e-68 phosphonate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.971
rssA_2
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: spj:MGAS2096_Spy1107 4.5e-39 two-component system histidine kinase K00936; Psort location: Cytoplasmic, score: 9.89.
 
   
 0.894
arlR_3
Putative response regulator ArlR; KEGG: pay:PAU_02990 2.6e-27 kdpE; DNA-binding transcriptional activator KdpE K07667; Psort location: Cytoplasmic, score: 9.67.
 
   
 0.875
lolD_5
KEGG: oih:OB0359 5.5e-73 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.741
KXA29988.1
ABC transporter, ATP-binding protein; KEGG: cby:CLM_0827 3.7e-90 macrolide export ATP-binding/permease MacB K02003; Psort location: CytoplasmicMembrane, score: 9.51.
 
 
 0.728
KXA29631.1
SNARE-like domain protein; KEGG: hse:Hsero_2476 4.4e-07 cls; phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.711
lolD_3
ABC transporter, ATP-binding protein; KEGG: lbh:Lbuc_0094 1.3e-78 phosphonate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.670
KXA31089.1
Peptidase, M56 family; KEGG: saj:SaurJH9_0030 3.1e-15 Beta-lactamase K02547; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.658
cusS_2
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cbf:CLI_0968 2.7e-41 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.624
KXA31090.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 6.6e-06 blaI; beta-lactamase K07737; Psort location: Cytoplasmic, score: 7.50.
 
     0.621
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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