STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebh_1Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 1.1e-89 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 8.19. (1333 aa)    
Predicted Functional Partners:
lolD_3
ABC transporter, ATP-binding protein; KEGG: lbh:Lbuc_0094 1.3e-78 phosphonate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.999
lolD_4
ABC transporter, ATP-binding protein; KEGG: cle:Clole_0679 1.2e-68 phosphonate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.990
lolD_5
KEGG: oih:OB0359 5.5e-73 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.989
KXA29988.1
ABC transporter, ATP-binding protein; KEGG: cby:CLM_0827 3.7e-90 macrolide export ATP-binding/permease MacB K02003; Psort location: CytoplasmicMembrane, score: 9.51.
 
 
 0.988
macB_3
ABC transporter, ATP-binding protein; KEGG: cbk:CLL_A2833 1.3e-71 macrolide export ATP-binding/permease protein MacB 2 K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.986
lolD_1
ABC transporter, ATP-binding protein; KEGG: taz:TREAZ_2826 8.5e-84 macrolide export ATP-binding/permease MacB 1/2 K02003; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
 0.986
lolD_2
KEGG: chy:CHY_2240 8.7e-43 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.51.
  
 
 0.986
KXA29559.1
Putative membrane fusion protein; KEGG: edi:EDI_024680 8.6e-05 GRIP domain-containing protein RUD3; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.940
KXA28700.1
Efflux transporter, RND family, MFP subunit; KEGG: edi:EDI_175070 1.3e-18 myosin-2 heavy chain, non muscle K10352.
  
 
 0.928
KXA31721.1
Hypothetical protein.
     
 0.727
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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