STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolD_3ABC transporter, ATP-binding protein; KEGG: lbh:Lbuc_0094 1.3e-78 phosphonate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 8.78. (255 aa)    
Predicted Functional Partners:
ebh_1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 1.1e-89 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 8.19.
 
 
 0.997
macB_4
Efflux ABC transporter, permease protein; KEGG: car:cauri_0317 8.2e-63 yknZ; Macrolide export ATP-binding/permease macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.966
yecS_1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 9.6e-37 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.878
gsiD_1
Putative oligopeptide ABC transporter, permease protein AppC; KEGG: pfe:PSF113_0899 3.1e-63 dppC2; protein DppC K12370; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  
 0.775
KXA31721.1
Hypothetical protein.
       0.676
KXA31722.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.668
KXA31723.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.668
KXA31715.1
KEGG: crd:CRES_0317 3.2e-08 ABC transporter ATP-binding protein/permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.612
drrA_2
KEGG: bya:BANAU_3288 4.1e-29 spaF; phosphate import ATP-binding protein pstB K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
    0.522
KXA29989.1
KEGG: crd:CRES_0317 2.3e-12 ABC transporter ATP-binding protein/permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.477
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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