Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dpnA_3KEGG: cyj:Cyan7822_1878 2.6e-66 DNA methylase N-4/N-6 domain-containing protein; K07319 putative adenine-specific DNA-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the N(4)/N(6)-methyltransferase family. (321 aa)    
Predicted Functional Partners:
iap_5
Phage tail component protein; KEGG: tva:TVAG_387410 1.7e-20 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; Psort location: Extracellular, score: 9.72.
 
    0.871
KXA31617.1
Hypothetical protein.
 
     0.864
KXA31618.1
Hypothetical protein; KEGG: fnu:FN0522 1.4e-05 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 7.50.
 
     0.833
lexA
Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
    
 0.817
KXA31616.1
Hypothetical protein.
       0.795
KXA31615.1
Hypothetical protein; KEGG: lmf:LMOf2365_1681 0.0069 PTS system sucrose-specific transporter subunit IIBC; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
       0.760
KXA31614.1
Hypothetical protein.
       0.737
KXA31621.1
Hypothetical protein; KEGG: cbj:H04402_02164 0.00019 multimodular transpeptidase-transglycosylase; Psort location: Cytoplasmic, score: 7.50.
       0.729
KXA31622.1
Hypothetical protein; KEGG: edi:EDI_341030 2.9e-05 intracellular protein transport protein USO1.
     
 0.712
dnaI_2
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.571
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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