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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31508.1uracil-DNA glycosylase family protein; KEGG: scp:HMPREF0833_10668 2.7e-48 ung2; uracil DNA glycosylase. (190 aa)    
Predicted Functional Partners:
ydiC
Universal bacterial protein YeaZ; KEGG: snc:HMPREF0837_10435 1.8e-28 gcp; M22 family O-sialoglycoprotein endopeptidase.
  
    0.582
KXA30812.1
KEGG: crn:CAR_c13520 1.1e-154 oadA; oxaloacetate decarboxylase subunit alpha K01571; Psort location: Cytoplasmic, score: 7.50.
  
    0.556
KXA31509.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.533
KXA31507.1
Hypothetical protein; KEGG: edi:EDI_282700 0.0012 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 7.50.
       0.456
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.