STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31490.1Hypothetical protein. (76 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.757
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.742
KXA30788.1
Hypothetical protein; KEGG: cbh:CLC_1639 0.0021 sensor histidine kinase.
  
  
 0.666
spoIIAB
KEGG: fma:FMG_1043 4.8e-19 hypothetical protein; K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.582
rsbW
Hypothetical protein; KEGG: cdl:CDR20291_3551 1.6e-09 rsbW; anti-sigma-B factor (serine-protein kinase); K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.582
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.533
KXA31489.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.448
KXA31485.1
ABC transporter, ATP-binding protein; KEGG: osp:Odosp_1369 5.4e-82 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.423
KXA31488.1
Cobalt transport protein; KEGG: bya:BANAU_0146 4.1e-09 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
       0.421
KXA31486.1
ABC transporter, ATP-binding protein; KEGG: cbi:CLJ_B1644 4.7e-83 putative multidrug export ATP-binding/permease K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.420
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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