Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
comEAcomEA protein; KEGG: has:Halsa_0780 1.8e-06 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 9.51. (216 aa)    
Predicted Functional Partners:
epsE
KEGG: pen:PSEEN2333 5.7e-87 XcpR-2; type II secretion pathway protein E K02454; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.759
outO
Bacterial peptidase A24 protein; KEGG: clj:CLJU_c05610 7.7e-35 bifunctional type IV leader peptidase/N-methyltransferase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.755
KXA30819.1
Hypothetical protein; KEGG: pfe:PSF113_5005 0.0016 pilC; protein PilC K02653.
  
  
 0.705
epsF
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 5.4e-27 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.705
KXA29648.1
KEGG: apb:SAR116_0501 2.8e-09 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.666
yvhJ_2
Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 9.51.
 
     0.659
yvhJ_1
Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.653
KXA30368.1
Prepilin-type cleavage/methylation protein.
  
  
 0.616
KXA31740.1
Putative ComE operon protein 2; KEGG: fma:FMG_1571 1.8e-60 putative late competence protein required for DNA binding; K01493 dCMP deaminase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.582
KXA31363.1
comF family protein; KEGG: ccm:Ccan_18380 1.7e-14 protein COM101A; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.565
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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