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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA31456.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (117 aa)    
Predicted Functional Partners:
KXA31457.1
DAK2 domain fusion protein YloV; KEGG: bcz:BCZK3615 4.8e-122 dhaK; dihydroxyacetone-related kinase K07030; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.972
KXA31430.1
EDD domain protein, DegV family; KEGG: mgf:MGF_3873 6.1e-19 DegV-like protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.668
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.641
KXA30909.1
EDD domain protein, DegV family; KEGG: bpb:bpr_I1097 2.4e-08 two component system histidine kinase; Psort location: Cytoplasmic, score: 7.50.
 
    0.626
KXA28885.1
EDD domain protein, DegV family; KEGG: mgf:MGF_3873 2.7e-25 DegV-like protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.615
rpmB
Ribosomal protein L28; KEGG: apb:SAR116_1905 0.0023 50S ribosomal protein L28 K02902; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL28 family.
       0.579
rsmD
RNA methyltransferase, RsmD family; KEGG: lmy:LM5923_2205 1.0e-30 hypothetical protein; K08316 16S rRNA (guanine966-N2)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
    0.569
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.551
KXA31461.1
Hypothetical protein; KEGG: fnu:FN0362 1.9e-08 ATP synthase subunit B K02109; Psort location: Cytoplasmic, score: 7.50.
       0.548
KXA31833.1
Hypothetical protein; Belongs to the UPF0297 family.
 
  
 0.429
Your Current Organism:
Peptoniphilus harei
NCBI taxonomy Id: 54005
Other names: ATCC BAA-601, CCUG 38491, CIP 105323, DSM 10020, NCTC 13076, P. harei, Peptostreptococcus harei, Schleiferella harei
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